Search results for "Flowering Plants"

showing 10 items of 12 documents

High and uneven levels of 45S rDNA site-number variation across wild populations of a diploid plant genus (Anacyclus, Asteraceae)

2017

The nuclear genome harbours hundreds to several thousand copies of ribosomal DNA. Despite their essential role in cellular ribogenesis few studies have addressed intrapopulation, interpopulation and interspecific levels of rDNA variability in wild plants. Some studies have assessed the extent of rDNA variation at the sequence and copy-number level with large sampling in several species. However, comparable studies on rDNA site number variation in plants, assessed with extensive hierarchical sampling at several levels (individuals, populations, species) are lacking. In exploring the possible causes for ribosomal loci dynamism, we have used the diploid genus Anacyclus (Asteraceae) as a suitab…

0106 biological sciences0301 basic medicineHereditylcsh:MedicineAsteraceae01 natural sciencesGenuslcsh:ScienceAnacyclusIn Situ Hybridization FluorescenceFlowering PlantsHeterozygosityMultidisciplinarybiologyChromosome BiologyEukaryotaPlantsKaryotypesPloidyResearch ArticleChromosome Structure and FunctionEvolutionary ProcessesContext (language use)DNA RibosomalChromosomes PlantChromosomesPolyploidyAnacyclusCytogenetics03 medical and health sciencesPolyploidBotanyGenetic variationGeneticsHybridizationRibosomal DNAEvolutionary Biologylcsh:ROrganismsGenetic VariationBiology and Life SciencesCell BiologyRibosomal RNAbiology.organism_classificationDiploidy030104 developmental biologyRNA RibosomalGenetic LociEvolutionary biologyKaryotypinglcsh:QDepartures from Diploidy010606 plant biology & botanyPLOS ONE
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Survey of five major grapevine viruses infecting Blatina and Žilavka cultivars in Bosnia and Herzegovina

2021

The sanitary status of grapevines has not yet been considered sufficiently in vineyards throughout Bosnia and Herzegovina (BiH). An extensive survey of five major grapevine viruses in the country was carried out in 2019. A total of 630 samples from the two dominant autochthonous cultivars, named Žilavka and Blatina, were tested by DAS-ELISA for the presence of grapevine leafroll-associated viruses (GLRaV-1 and 3), grapevine fleck virus (GFkV), grapevine fanleaf virus (GFLV) and Arabis mosaic virus (ArMV). Eighty-eight % of the samples were positive for at least one virus, and all five viruses were detected, thought with different incidence, i.e. GLRaV-3 (84%), GFLV (43%), GLRaV-1 (14%), GFk…

0106 biological sciences0301 basic medicineVeterinary medicineArtificial Gene Amplification and ExtensionDisease VectorsPathology and Laboratory MedicinePolymerase Chain Reaction01 natural sciencesPlant VirusesMedical ConditionsXiphinemaMedicine and Health SciencesVitisCultivarNematode InfectionsFlowering PlantsPhylogenyData Managementeducation.field_of_studyMultidisciplinarybiologyPhylogenetic treeQREukaryotaPhylogenetic AnalysisGrapevine fanleaf virusPlantsPhylogeneticsInfectious DiseasesMedical MicrobiologyViral PathogensVirusesMedicineRNA ViralGrapevineViral VectorsPathogensPlant ViruseResearch ArticleComputer and Information SciencesSciencePopulationPlant DiseaseResearch and Analysis Methodsno key wordsMicrobiologyVirusArabis mosaic virus03 medical and health sciencesVirologyParasitic DiseasesEvolutionary SystematicsMolecular Biology TechniqueseducationMolecular BiologyMicrobial PathogensTaxonomyPlant DiseasesBosnia and HerzegovinaEvolutionary BiologyGenetic diversityOrganismsBiology and Life SciencesSettore AGR/12 - Patologia VegetaleReverse Transcriptase-Polymerase Chain Reactionbiology.organism_classificationVector-Borne DiseasesSpecies Interactions030104 developmental biologyViral Transmission and Infection010606 plant biology & botany
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Degradation of sexual reproduction in Veronica filiformis after introduction to Europe

2011

Abstract Background Baker’s law predicts that self-incompatible plant species are generally poor colonizers because their mating system requires a high diversity of genetically differentiated individuals and thus self-compatibility should develop after long-distance dispersal. However, cases like the introduction of the self-incompatible Veronica filiformis (Plantaginaceae) to Europe constitute an often overlooked alternative to this rule. This species was introduced from subalpine areas of the Pontic-Caucasian Mountains and colonized many parts of Central and Western Europe in the last century, apparently without producing seeds. To investigate the consequences of the absence of sexual rep…

0106 biological sciencesDNA PlantEvolutionIntroduced speciesFlowersBiologymedicine.disease_cause010603 evolutionary biology01 natural sciences03 medical and health sciencesGenetics (medical genetics to be 30107 and agricultural genetics to be 40402)PollenBotanyQH359-425medicineAmplified Fragment Length Polymorphism AnalysisOvuleCrosses GeneticEcology Evolution Behavior and Systematics030304 developmental biologyOvuleAnalysis of VarianceEvolutionary Biology0303 health sciencesGeographyEcologyObligateReproductionVeronica filiformisBotanyGenetic VariationSelf-Incompatibility in Flowering Plantsfood and beverages15. Life on landMating systembiology.organism_classificationVeronicaSexual reproductionEuropeSeedsPollenBiological dispersalIntroduced SpeciesResearch ArticleBMC Evolutionary Biology
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Conserved Organisation of 45S rDNA Sites and rDNA Gene Copy Number among Major Clades of Early Land Plants

2016

Genes encoding ribosomal RNA (rDNA) are universal key constituents of eukaryotic genomes, and the nuclear genome harbours hundreds to several thousand copies of each species. Knowledge about the number of rDNA loci and gene copy number provides information for comparative studies of organismal and molecular evolution at various phylogenetic levels. With the exception of seed plants, the range of 45S rDNA locus (encoding 18S, 5.8S and 26S rRNA) and gene copy number variation within key evolutionary plant groups is largely unknown. This is especially true for the three earliest land plant lineages Marchantiophyta (liverworts), Bryophyta (mosses), and Anthocerotophyta (hornworts). In this work…

0301 basic medicineHepatophytaArabidopsisGene Dosagelcsh:MedicinePlant ScienceBryologyPlant GeneticsBiochemistryPlant GenomicsCopy-number variationlcsh:ScienceNonvascular PlantsFlowering PlantsConserved SequenceIn Situ Hybridization FluorescencePhylogenyGeneticsMultidisciplinaryPhylogenetic treeChromosome BiologyGenomicsPlantsNucleic acidsRibosomal RNARNA PlantCytogenetic AnalysisMarchantiophytaResearch ArticleBiotechnologyCell biologyNuclear geneCellular structures and organellesDNA PlantPseudogeneLocus (genetics)AnthocerotophytaBryophytaBiologyGenes PlantReal-Time Polymerase Chain ReactionDNA RibosomalChromosomesChromosomes PlantEvolution Molecular03 medical and health sciencesSpecies SpecificityGeneticsMossesNon-coding RNARibosomal DNAlcsh:ROrganismsBiology and Life Sciences030104 developmental biologyGenetic LociRNA RibosomalRNAEmbryophytalcsh:QBryophytePlant BiotechnologyRibosomesPLoS ONE
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Screening of herbal extracts for TLR2- and TLR4-dependent anti-inflammatory effects.

2018

Herbal extracts represent an ample source of natural compounds, with potential to be used in improving human health. There is a growing interest in using natural extracts as possible new treatment strategies for inflammatory diseases. We therefore aimed at identifying herbal extracts that affect inflammatory signaling pathways through toll-like receptors (TLRs), TLR2 and TLR4. Ninety-nine ethanolic extracts were screened in THP-1 monocytes and HeLa-TLR4 transfected reporter cells for their effects on stimulated TLR2 and TLR4 signaling pathways. The 28 identified anti-inflammatory extracts were tested in comparative assays of stimulated HEK-TLR2 and HEK-TLR4 transfected reporter cells to dif…

0301 basic medicineLeavesHumulus lupulusTHP-1 CellsPhysiologymedicine.medical_treatmentAnti-Inflammatory AgentsDrug Evaluation Preclinicallcsh:MedicinePlant SciencePharmacologyPlant RootsImmune ReceptorsBiochemistryMonocytesWhite Blood CellsCell SignalingAnimal CellsImmune PhysiologyMedicine and Health SciencesMembrane Receptor Signalinglcsh:ScienceToll-like ReceptorsFlowering PlantsInnate Immune SystemMultidisciplinaryImmune System ProteinsbiologyOrganic CompoundsPlant AnatomyEukaryotaPlantsImmune Receptor SignalingChemistryCytokinevisual_artPhysical Sciencesvisual_art.visual_art_mediumPlant BarkCytokinesBarkSignal transductionCellular TypesResearch ArticleSignal Transductionmedicine.drug_classImmune CellsImmunologyTransfectionAnti-inflammatory03 medical and health sciencesmedicineHumansBlood CellsEthanolPlant ExtractsMacrophagesCinnamomum verumlcsh:ROrganic ChemistryOrganismsChemical CompoundsBiology and Life SciencesProteinsCell BiologyMolecular Developmentbiology.organism_classificationToll-Like Receptor 2Plant LeavesToll-Like Receptor 4TLR2030104 developmental biologyHEK293 CellsGene Expression RegulationCell cultureAlcoholsImmune Systemlcsh:QHeLa CellsDevelopmental BiologyPloS one
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Tick-borne pathogens in Ixodes ricinus ticks collected from migratory birds in southern Norway

2020

Birds are important hosts for the first life stages of the Ixodes ricinus tick and they can transport their parasites over long distances. The aim of this study was to investigate the prevalence of Borrelia burgdorferi sensu lato, Anaplasma phagocytophilum, Neoehrlichia mikurensis and Rickettsia helvetica in ticks collected from migratory birds in Norway. A total of 815 Ixodes ricinus ticks from 216 birds trapped at Lista Bird Observatory in southern Norway during spring and autumn migration in 2008 were analysed by real-time PCR. B. burgdorferi s. l. was the most prevalent pathogen, detected in 6.1% of the ticks. The prevalence of N. mikurensis, A. phagocytophilum and R. helvetica was 1.2%…

Bacterial Diseases0301 basic medicineLife CyclesSocial SciencesDisease VectorsPathology and Laboratory Medicinemedicine.disease_causePolymerase Chain ReactionTicks0302 clinical medicineMedicine and Health SciencesPrevalencePsychologyRickettsiaFlowering PlantsTick-borne diseaseMultidisciplinaryAnimal BehaviorCoinfectionNorwayQREukaryotaPlantsBacterial PathogensSpringAnaplasmataceaeInfectious DiseasesMedical MicrobiologyTick-Borne DiseasesVertebratesMedicineSeasonsPathogensResearch ArticleAnaplasma phagocytophilumDNA BacterialIxodes ricinusBorrelia BurgdorferiArthropodaScience030106 microbiology030231 tropical medicineZoologyBiologyTickMicrobiologyBirds03 medical and health sciencesBorreliaArachnidaparasitic diseasesmedicineVDP::Matematikk og Naturvitenskap: 400::Basale biofag: 470AnimalsBorrelia burgdorferiMicrobial PathogensBehaviorBacteriaIxodesRicinusBird DiseasesBorreliaOrganismsBiology and Life Sciencesbiology.organism_classificationmedicine.diseasebacterial infections and mycosesInvertebratesBorrelia InfectionAnaplasma phagocytophilumNymphsTick InfestationsSpecies InteractionsRickettsia helveticaAmniotesEarth SciencesAnimal MigrationIxodesZoologyDevelopmental Biology
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Genetic and Ecotypic Differentiation in a Californian Plant Polyploid Complex (Grindelia, Asteraceae)

2014

Studies of ecotypic differentiation in the California Floristic Province have contributed greatly to plant evolutionary biology since the pioneering work of Clausen, Keck, and Hiesey. The extent of gene flow and genetic differentiation across interfertile ecotypes that span major habitats in the California Floristic Province is understudied, however, and is important for understanding the prospects for local adaptation to evolve or persist in the face of potential gene flow across populations in different ecological settings. We used microsatellite data to examine local differentiation in one of these lineages, the Pacific Coast polyploid complex of the plant genus Grindelia (Asteraceae). W…

Evolutionary GeneticsMarshPlant EvolutionSpeciationlcsh:MedicinePlant ScienceCaliforniaGene flowPloidyMolecular SystematicsNatural Selectionlcsh:ScienceFlowering Plantseducation.field_of_studyMultidisciplinarygeography.geographical_feature_categoryGeographyEcotypeEcologyfood and beveragesPolyploid complexPlantsBiological EvolutionHabitatResearch ArticleGene FlowEvolutionary ProcessesGrindeliaGenotypeGeneral Science & TechnologyPopulationParallel EvolutionBiologyPolyploidyGrindeliaEvolutionary Adaptationparasitic diseasesGeneticsEvolutionary SystematicseducationHybridizationTaxonomyLocal adaptationEcotypeEvolutionary BiologygeographyPopulation Biologylcsh:ROrganismsBiology and Life SciencesGeobotanyPlant Taxonomybiology.organism_classificationOrganismal EvolutionGenetic Locilcsh:QPopulation GeneticsMicrosatellite RepeatsPLoS ONE
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Transmission modes affect the population structure of potato virus Y in potato.

2020

Transmission is a crucial part of a viral life cycle and transmission mode can have an important impact on virus biology. It was demonstrated that transmission mode can influence the virulence and evolution of a virus; however, few empirical data are available to describe the direct underlying changes in virus population structure dynamics within the host. Potato virus Y (PVY) is an RNA virus and one of the most damaging pathogens of potato. It comprises several genetically variable strains that are transmitted between plants via different transmission modes. To investigate how transmission modes affect the within-plant viral population structure, we have used a deep sequencing approach to …

LeavesvirusesPotyvirusPlant Sciencelaw.inventionlawVegetablesBiology (General)Flowering PlantsGenetics0303 health sciencesEcologyPlant Anatomy030302 biochemistry & molecular biologyEukaryotafood and beveragesPlantsPlant TubersTransmission (mechanics)Potato virus YViral evolutionPotatoResearch ArticleNicotianaEcological MetricsQH301-705.5ImmunologyVirulenceBiologyViral StructureSolanumModels BiologicalMicrobiologyVirusViral Evolution03 medical and health sciencesViral life cycleVirologyGeneticsMolecular Biology030304 developmental biologyPlant DiseasesSolanum tuberosumEvolutionary BiologyTubersPopulation BiologyHost (biology)Ecology and Environmental SciencesfungiOrganismsBiology and Life SciencesRNA virusSpecies DiversityRC581-607biology.organism_classificationOrganismal EvolutionPlant LeavesMicrobial EvolutionParasitologyImmunologic diseases. AllergyPopulation GeneticsPLoS Pathogens
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Do bank voles (Myodes glareolus) trapped in live and lethal traps show differences in tick burden?

2020

In studies assessing tick abundance, the use of live traps to capture and euthanize rodent hosts is a commonly used method to determine their burden. However, captive animals can experience debilitating or fatal capture stress as a result prior to collection. An alternative method is the use of lethal traps, but this can potentially lead to tick drop-off between the time of capture and collection. In this study, in order to determine whether subjecting animals to capture stress is inevitable, we tested the difference in sheep tick (Ixodes ricinus) larval burdens between bank voles (Myodes glareolus) captured alive and euthanized, and lethally trapped bank voles. During 2017 and 2018, 1318 b…

Male0106 biological sciencesLife CyclesRodentMyodes glareolusDisease Vectors01 natural sciencesLarvaeMedical ConditionsTicks0302 clinical medicineMedicine and Health SciencesFlowering PlantsMammalsAlternative methodsLarvaMultidisciplinaryArvicolinaeNorwayQREukaryotaRuminantsPlantsSpringInfectious DiseasesLarvaEpidemiological MonitoringVertebratesMedicineFemaleSeasonsSex ratioResearch ArticleIxodes ricinusArthropodaScience030231 tropical medicineZoologyBiologyTickRodents010603 evolutionary biology03 medical and health sciencesbiology.animalArachnidaAnimalsCollection methodsIxodesEuthanasiaRicinusDeerVolesOrganismsBiology and Life Sciencesbiology.organism_classificationInvertebratesTick InfestationsSpecies InteractionsAmniotesEarth SciencesZoologyDevelopmental BiologyVDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480
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Taxas de substituições das Annonaceas: uma perspectiva do modelo códon

2014

The Annonaceae includes cultivated species of economic interest and represents an important source of information for better understanding the evolution of tropical rainforests. In phylogenetic analyses of DNA sequence data that are used to address evolutionary questions, it is imperative to use appropriate statistical models. Annonaceae are cases in point: Two sister clades, the subfamilies Annonoideae and Malmeoideae, contain the majority of Annonaceae species diversity. The Annonoideae generally show a greater degree of sequence divergence compared to the Malmeoideae, resulting in stark differences in branch lengths in phylogenetic trees. Uncertainty in how to interpret and analyse these…

Nonsynonymous substitutionmodelo códondiversificationcomprimentos dos ramosSynonymous substitution ratecharactersfilogenéticaAnnonaceaePlant Sciencelcsh:Plant cultureDNA sequencinggeneraMolecular evolutionPhylogeneticsCodon modelsphylogeny reconstructionLaboratorium voor Moleculaire Biologielcsh:SB1-1110patternsCladeNon-synonymous substitutionNdhFGeneticsflowering plantsPhylogenetic treebiologyhistorical biogeographymolecular evolutionBiology and Life Sciencesbiology.organism_classificationBiosystematiekratePhylogeneticsAnnonaceaesubstituições não-sinônimassubstituições sinônimasBiosystematicsBranch lengthsNon-synonymous substitution ratemaximum-likelihoodLaboratory of Molecular BiologyEPSAgronomy and Crop ScienceFood Sciencenucleotide substitution
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